sample_name swab_label BarcodeSequence LIBRARY_CONSTRUCTION _PROTOCOL LINKER PLATFORM PRIMER RUN_CENTER RUN_DATE RUN_PREFIX pcr_primers sequencing_meth target_gene target_subfragment center_name center_project_name INSTRUMENT_MODEL Seq_Plate Seq_well 16s_PrimerPlate 16s_PrimerWell cow_id lactation_number DOB age_days calf_cow body_site animal Notes 2019.3.14.calf.fecal.1 C.F.1 ACACGTTTGGGT Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 D8 Plate 4 D8 86838 0 unknown unknown calf fecal calf.1 2019.3.14.calf.fecal.1.rep C.F.1.rep CGTGAGGACCAG Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 F9 Plate 4 F9 86838 0 unknown unknown calf fecal calf.1 2019.3.14.calf.fecal.10 C.F.10 CCACTGCCCACC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 B4 Plate 4 B4 86846 0 unknown unknown calf fecal calf.10 2019.3.14.calf.fecal.11 C.F.11 CACCATCTCCGG Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 D9 Plate 3 D9 86842 0 unknown unknown calf fecal calf.11 2019.3.14.calf.fecal.11.rep C.F.11.rep GACCCGTTTCGC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 B6 Plate 4 B6 86842 0 unknown unknown calf fecal calf.11 2019.3.14.calf.fecal.12 C.F.12 TGCTACAGACGT Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 A10 Plate 4 A10 86816 0 2/3/19 43 calf fecal calf.12 2019.3.14.calf.fecal.13 C.F.13 ACTGCCCGATAC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 H4 Plate 4 H4 86843 0 unknown unknown calf fecal calf.13 2019.3.14.calf.fecal.13.rep C.F.13.rep GTTGTTCTGGGA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 H3 Plate 3 H3 86843 0 unknown unknown calf fecal calf.13 2019.3.14.calf.fecal.14 C.F.14 CATTTGACGACG Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 F1 Plate 3 F1 86841 0 unknown unknown calf fecal calf.14 2019.3.14.calf.fecal.15 C.F.15 ATTTACAATTGA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 B3 Plate 4 B3 86839 0 unknown unknown calf fecal calf.15 2019.3.14.calf.fecal.15.rep C.F.15.rep TTGTGTCTCCCT Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 A5 Plate 3 A5 86839 0 unknown unknown calf fecal calf.15 2019.3.14.calf.fecal.16 C.F.16 AGTTCTCATTAA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 C10 Plate 3 C10 86836 0 unknown unknown calf fecal calf.16 2019.3.14.calf.fecal.17 C.F.17 GGTCTTAGCACC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 H2 Plate 4 H2 86845 0 unknown unknown calf fecal calf.17 2019.3.14.calf.fecal.17.rep C.F.17.rep CAACGAACCATC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 D7 Plate 4 D7 86845 0 unknown unknown calf fecal calf.17 2019.3.14.calf.fecal.19 C.F.19 CGGCCAGAAGCA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 E6 Plate 3 E6 86840 0 unknown unknown calf fecal calf.19 2019.3.14.calf.fecal.19.rep C.F.19.rep CCGAGGTATAAT Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 B7 Plate 3 B7 86840 0 unknown unknown calf fecal calf.19 2019.3.14.calf.fecal.2 C.F.2 CAAACCTATGGC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 E12 Plate 3 E12 86817 0 2/3/19 43 calf fecal calf.2 2019.3.14.calf.fecal.20 C.F.20 AACCACTAACCG Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 A7 Plate 3 A7 86849 0 unknown unknown calf fecal calf.20 2019.3.14.calf.fecal.3 C.F.3 GTTGCTGAGTCC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 G10 Plate 3 G10 86847 0 unknown unknown calf fecal calf.3 2019.3.14.calf.fecal.3.rep C.F.3.rep CCTCGCATGACC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 A1 Plate 3 A1 86847 0 unknown unknown calf fecal calf.3 2019.3.14.calf.fecal.4 C.F.4 GCCACCGCCGGA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 H6 Plate 3 H6 86811 0 2/1/19 45 calf fecal calf.4 2019.3.14.calf.fecal.5 C.F.5 GTTAACTTACTA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 H2 Plate 3 H2 86810 0 2/1/19 45 calf fecal calf.5 2019.3.14.calf.fecal.5.rep C.F.5.rep GCTGCGTATACC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 G1 Plate 3 G1 86810 0 2/1/19 45 calf fecal calf.5 2019.3.14.calf.fecal.6 C.F.6 ACGTTAATATTC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 B8 Plate 4 B8 86798 0 1/31/19 46 calf fecal calf.6 2019.3.14.calf.fecal.7 C.F.7 GAGCCATCTGTA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 C11 Plate 3 C11 86835 0 unknown 0 calf fecal calf.7 2019.3.14.calf.fecal.7.rep C.F.7.rep CGCTAGGATGTT Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 C10 Plate 4 C10 86835 0 unknown 0 calf fecal calf.7 2019.3.14.calf.fecal.8 C.F.8 TATATAGTATCC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 C1 Plate 4 C1 86844 0 unknown 0 calf fecal calf.8 2019.3.14.calf.fecal.9 C.F.9 ACGTGCCTTAGA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 E3 Plate 3 E3 86812 0 2/2/19 44 calf fecal calf.9 2019.3.14.calf.fecal.9.rep C.F.9.rep TTCTTAACGCCT Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 H5 Plate 4 H5 86812 0 2/2/19 44 calf fecal calf.9 2019.3.14.cow.fecal.15 cow.F.1 ATTATGATTATG Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 G6 Plate 3 G6 74937 1 8/12/16 948 cow fecal cow.15 2019.3.14.cow.fecal.15.rep cow.F.1.rep TCTAACGAGTGC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 B9 Plate 4 B9 74937 1 8/12/16 948 cow fecal cow.15 2019.3.14.cow.fecal.2 cow.F.10 ACCAGTGACTCA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 G3 Plate 4 G3 35452 1 1/31/17 776 cow fecal cow.2 2019.3.14.cow.fecal.9 cow.F.11 CTCACCTAGGAA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 F1 Plate 4 F1 74890 1 8/9/16 951 cow fecal cow.9 2019.3.14.cow.fecal.9.rep cow.F.11.rep GTGTCGAGGGCA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 D10 Plate 3 D10 74890 1 8/9/16 951 cow fecal cow.9 2019.3.14.cow.fecal.1 cow.F.12 GTTCGCCGCATC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 E7 Plate 4 E7 82086 1 2/18/17 758 cow fecal cow.1 2019.3.14.cow.fecal.14 cow.F.13 CTACTTACATCC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 D10 Plate 4 D10 82486 1 3/26/17 722 cow fecal cow.14 2019.3.14.cow.fecal.14.rep cow.F.13.rep ACTTAGACTCTT Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 H8 Plate 4 H8 82486 1 3/26/17 722 cow fecal cow.14 2019.3.14.cow.skin.rump.4 cow.F.14 GAATATACCTGG Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 C4 Plate 4 C4 29173 1 8/7/16 953 cow skin cow.4 2019.3.14.cow.fecal.19 cow.F.15 CAATGTAGACAC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 A6 Plate 3 A6 23242 2 3/15/16 1098 cow fecal cow.19 2019.3.14.cow.fecal.19.rep cow.F.15.rep CAAATTCGGGAT Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 A4 Plate 3 A4 23242 2 3/15/16 1098 cow fecal cow.19 2019.3.14.cow.fecal.16 cow.F.16 TCTTATAACGCT Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 G8 Plate 3 G8 67108 1 4/14/17 703 cow fecal cow.16 2019.3.14.cow.fecal.20 cow.F.17 ATTGCCTTGATT Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 C6 Plate 4 C6 82258 1 3/5/17 743 cow fecal cow.20 2019.3.14.cow.fecal.20.rep cow.F.17.rep GGACCTGGATGG Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 H9 Plate 4 H9 82258 1 3/5/17 743 cow fecal cow.20 2019.3.14.cow.fecal.11 cow.F.18 GCCTACTCTCGG Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 H3 Plate 4 H3 80192 1 10/20/16 879 cow fecal cow.11 2019.3.14.cow.fecal.7 cow.F.19 CGCAATGAGGGA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 D1 Plate 3 D1 82108 1 2/20/17 756 cow fecal cow.7 2019.3.14.cow.fecal.7.rep cow.F.19.rep GAAGTAGCGAGC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 D8 Plate 3 D8 82108 1 2/20/17 756 cow fecal cow.7 2019.3.14.cow.fecal.6 cow.F.2 CTATCTCCTGTC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 B12 Plate 3 B12 75111 1 8/24/16 936 cow fecal cow.6 2019.3.14.cow.fecal.3 cow.F.20 GTTCGAGTGAAT Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 F7 Plate 4 F7 66578 1 1/18/17 789 cow fecal cow.3 2019.3.14.cow.fecal.18 cow.F.3 CACCCTTGCGAC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 F3 Plate 3 F3 82144 1 2/24/17 752 cow fecal cow.18 2019.3.14.cow.fecal.18.rep cow.F.3.rep TGGTGGAGTTTC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 C6 Plate 3 C6 82144 1 2/24/17 752 cow fecal cow.18 2019.3.14.cow.fecal.12 cow.F.4 AGAATCCACCAC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 D12 Plate 3 D12 67180 1 4/21/17 696 cow fecal cow.12 2019.3.14.cow.fecal.17 cow.F.5 AGTGTTTCGGAC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 E10 Plate 3 E10 67167 1 4/20/17 697 cow fecal cow.17 2019.3.14.cow.fecal.17.rep cow.F.5.rep AGTTGTAGTCCG Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 E4 Plate 3 E4 67167 1 4/20/17 697 cow fecal cow.17 2019.3.14.cow.fecal.10 cow.F.6 CCAGGACAGGAA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 A9 Plate 3 A9 29093 1 8/7/16 953 cow fecal cow.10 2019.3.14.cow.fecal.13 cow.F.7 AACCGCATAAGT Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 C8 Plate 3 C8 82458 1 3/22/17 726 cow fecal cow.13 2019.3.14.cow.fecal.13.rep cow.F.7.rep AGTGCAGGAGCC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 F10 Plate 3 F10 82458 1 3/22/17 726 cow fecal cow.13 2019.3.14.cow.fecal.8 cow.F.8 CAGGCCACTCTC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 D2 Plate 4 D2 35516 1 4/12/17 705 cow fecal cow.8 2019.3.14.cow.fecal.5 cow.F.9 GAGAAGCTTATA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 H1 Plate 3 H1 45163 0 1/0/00 0 cow fecal cow.5 2019.3.14.cow.fecal.5.rep cow.F.9.rep GTTTATCTTAAG Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 E6 Plate 4 E6 45163 0 1/0/00 0 cow fecal cow.5 2019.3.14.cow.nasal.18 cow.N.1 GCGCGGCGTTGC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 A10 Plate 3 A10 82144 1 2/24/17 752 cow nasal cow.18 2019.3.14.cow.nasal.18.rep cow.N.1.rep GAATCTGACAAC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 C5 Plate 4 C5 82144 1 2/24/17 752 cow nasal cow.18 2019.3.14.cow.nasal.6 cow.N.10 TTAACAAGGCAA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 C7 Plate 3 C7 75111 1 8/24/16 936 cow nasal cow.6 2019.3.14.cow.nasal.15 cow.N.11 ACCCAAGCGTTA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 E2 Plate 4 E2 74937 1 8/12/16 948 cow nasal cow.15 2019.3.14.cow.nasal.15.rep cow.N.11.rep AGCGATTCCTCG Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 E9 Plate 4 E9 74937 1 8/12/16 948 cow nasal cow.15 2019.3.14.cow.nasal.1 cow.N.12 AATACAGACCTG Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 B2 Plate 3 B2 82086 1 2/18/17 758 cow nasal cow.1 2019.3.14.cow.nasal.11 cow.N.13 TCCGCCTAGTCG Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 A12 Plate 3 A12 80192 1 10/20/16 879 cow nasal cow.11 2019.3.14.cow.nasal.11.rep cow.N.13.rep CGGCCTAAGTTC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 G7 Plate 4 G7 80192 1 10/20/16 879 cow nasal cow.11 2019.3.14.cow.nasal.8 cow.N.14 GCCGCCAGGGTC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 H5 Plate 3 H5 35516 1 4/12/17 705 cow nasal cow.8 2019.3.14.cow.nasal.3 cow.N.15 GTCCTACACAGC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 B2 Plate 4 B2 66578 1 1/18/17 789 cow nasal cow.3 2019.3.14.cow.nasal.3.rep cow.N.15.rep GTACTCGAACCA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 F11 Plate 3 F11 66578 1 1/18/17 789 cow nasal cow.3 2019.3.14.cow.nasal.7 cow.N.16 AAGGCGCTCCTT Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 C1 Plate 3 C1 82108 1 2/20/17 756 cow nasal cow.7 2019.3.14.cow.nasal.2 cow.N.17 ATAATTGCCGAG Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 H9 Plate 3 H9 35452 1 1/31/17 776 cow nasal cow.2 2019.3.14.cow.nasal.2.rep cow.N.17.rep GATATACCAGTG Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 C12 Plate 3 C12 35452 1 1/31/17 776 cow nasal cow.2 2019.3.14.cow.nasal.5 cow.N.18 TTAGTTTGTCAC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 G4 Plate 3 G4 45163 0 1/0/00 0 cow nasal cow.5 2019.3.14.cow.nasal.4 cow.N.19 ATGCCTCGTAAG Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 G3 Plate 3 G3 29173 1 8/7/16 953 cow nasal cow.4 2019.3.14.cow.nasal.4.rep cow.N.19.rep GATAGCACTCGT Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 A8 Plate 4 A8 29173 1 8/7/16 953 cow nasal cow.4 2019.3.14.cow.nasal.17 cow.N.2 CCACAACGATCA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 C9 Plate 3 C9 67167 1 4/20/17 697 cow nasal cow.17 2019.3.14.cow.nasal.9 cow.N.20 TCTTGCGGAGTC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 B11 Plate 3 B11 74890 1 8/9/16 951 cow nasal cow.9 2019.3.14.cow.nasal.16 cow.N.3 CGCGCAAGTATT Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 B1 Plate 3 B1 67108 1 4/14/17 703 cow nasal cow.16 2019.3.14.cow.nasal.16.rep cow.N.3.rep GAGTCTTGGTAA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 F5 Plate 4 F5 67108 1 4/14/17 703 cow nasal cow.16 2019.3.14.cow.nasal.12 cow.N.4 TCCGATAATCGG Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 D6 Plate 3 D6 67180 1 4/21/17 696 cow nasal cow.12 2019.3.14.cow.nasal.13 cow.N.5 TTAGGATTCTAT Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 D6 Plate 4 D6 82458 1 3/22/17 726 cow nasal cow.13 2019.3.14.cow.nasal.13.rep cow.N.5.rep CCATGTGGCTCC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 C8 Plate 4 C8 82458 1 3/22/17 726 cow nasal cow.13 2019.3.14.cow.nasal.19 cow.N.6 GGACAAGTGCGA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 B3 Plate 3 B3 23242 2 3/15/16 1098 cow nasal cow.19 2019.3.14.cow.nasal.20 cow.N.7 ACACACCCTGAC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 H7 Plate 3 H7 82258 1 3/5/17 743 cow nasal cow.20 2019.3.14.cow.nasal.20.rep cow.N.7.rep CAGTCTAGTACG Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 F6 Plate 4 F6 82258 1 3/5/17 743 cow nasal cow.20 2019.3.14.cow.nasal.14 cow.N.8 AGTCCGAGTTGT Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 F8 Plate 4 F8 82486 1 3/26/17 722 cow nasal cow.14 2019.3.14.cow.nasal.10 cow.N.9 TCGAGCCGATCT Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 F9 Plate 3 F9 29093 1 8/7/16 953 cow nasal cow.10 2019.3.14.cow.nasal.10.rep cow.N.9.rep AGACTTCTCAGG Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 B10 Plate 3 B10 29093 1 8/7/16 953 cow nasal cow.10 2019.3.14.cow.oral.18 cow.O.1 AAGTCACACACA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 D7 Plate 3 D7 82144 1 2/24/17 752 cow oral cow.18 2019.3.14.cow.oral.18.rep cow.O.1.rep CCGGCCGCGTGC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 G5 Plate 3 G5 82144 1 2/24/17 752 cow oral cow.18 2019.3.14.cow.oral.6 cow.O.10 TATAGGCTCCGC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 H8 Plate 3 H8 75111 1 8/24/16 936 cow oral cow.6 2019.3.14.cow.oral.15 cow.O.11 CATAAGGGAGGC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 D1 Plate 4 D1 74937 1 8/12/16 948 cow oral cow.15 2019.3.14.cow.oral.15.rep cow.O.11.rep GACGTTAAGAAT Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 C5 Plate 3 C5 74937 1 8/12/16 948 cow oral cow.15 2019.3.14.cow.oral.1 cow.O.12 ATAGTTAGGGCT Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 B5 Plate 4 B5 82086 1 2/18/17 758 cow oral cow.1 2019.3.14.cow.oral.1.rep cow.O.12.rep CTCCCGAGCTCC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 H6 Plate 4 H6 82086 1 2/18/17 758 cow oral cow.1 2019.3.14.cow.oral.11 cow.O.13 TTGCCGCTCTGG Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 B9 Plate 3 B9 80192 1 10/20/16 879 cow oral cow.11 2019.3.14.cow.oral.11.rep cow.O.13.rep AGACTATTTCAT Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 E8 Plate 4 E8 80192 1 10/20/16 879 cow oral cow.11 2019.3.14.cow.oral.8 cow.O.14 GTGGGACTGCGC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 G6 Plate 4 G6 35516 1 4/12/17 705 cow oral cow.8 2019.3.14.cow.oral.3 cow.O.15 ATTTCCGCTAAT Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 E11 Plate 3 E11 66578 1 1/18/17 789 cow oral cow.3 2019.3.14.cow.oral.3.rep cow.O.15.rep GATCCCACGTAC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 B10 Plate 4 B10 66578 1 1/18/17 789 cow oral cow.3 2019.3.14.cow.oral.7 cow.O.16 AGAGACGCGTAG Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 G9 Plate 4 G9 82108 1 2/20/17 756 cow oral cow.7 2019.3.14.cow.oral.2 cow.O.17 AGATGCAATGAT Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 F2 Plate 4 F2 35452 1 1/31/17 776 cow oral cow.2 2019.3.14.cow.oral.2.rep cow.O.17.rep TTACTTATCCGA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 D4 Plate 3 D4 35452 1 1/31/17 776 cow oral cow.2 2019.3.14.cow.oral.5 cow.O.18 GCGAGGAAGTCC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 A3 Plate 3 A3 45163 0 1/0/00 0 cow oral cow.5 2019.3.14.cow.oral.4 cow.O.19 TGGCAGCGAGCC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 E7 Plate 3 E7 29173 1 8/7/16 953 cow oral cow.4 2019.3.14.cow.oral.4.rep cow.O.19.rep ACTAAGTACCCG Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 F2 Plate 3 F2 29173 1 8/7/16 953 cow oral cow.4 2019.3.14.cow.oral.17 cow.O.2 ACGGCGTTATGT Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 E1 Plate 3 E1 67167 1 4/20/17 697 cow oral cow.17 2019.3.14.cow.oral.9 cow.O.20 GTAATTGTAATT Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 A9 Plate 4 A9 74890 1 8/9/16 951 cow oral cow.9 2019.3.14.cow.oral.16 cow.O.3 AACTTTCAGGAG Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 A8 Plate 3 A8 67108 1 4/14/17 703 cow oral cow.16 2019.3.14.cow.oral.16.rep cow.O.3.rep CAGATCCCAACC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 A7 Plate 4 A7 67108 1 4/14/17 703 cow oral cow.16 2019.3.14.cow.oral.12 cow.O.4 ATGGGACCTTCA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 D5 Plate 3 D5 67180 1 4/21/17 696 cow oral cow.12 2019.3.14.cow.oral.13 cow.O.5 TAGGACGGGAGT Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 A1 Plate 4 A1 82458 1 3/22/17 726 cow oral cow.13 2019.3.14.cow.oral.13.rep cow.O.5.rep TAAGGTCGATAA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 G9 Plate 3 G9 82458 1 3/22/17 726 cow oral cow.13 2019.3.14.cow.oral.19 cow.O.6 GAACCGTGCAGG Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 E2 Plate 3 E2 23242 2 3/15/16 1098 cow oral cow.19 2019.3.14.cow.oral.20 cow.O.7 TACTGTACTGTT Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 G1 Plate 4 G1 82258 1 3/5/17 743 cow oral cow.20 2019.3.14.cow.oral.20.rep cow.O.7.rep TCGCTACAGATG Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 F6 Plate 3 F6 82258 1 3/5/17 743 cow oral cow.20 2019.3.14.cow.oral.14 cow.O.8 TACGGTCTGGAT Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 B4 Plate 3 B4 82486 1 3/26/17 722 cow oral cow.14 2019.3.14.cow.oral.10 cow.O.9 ACTGGCAAACCT Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 E3 Plate 4 E3 29093 1 8/7/16 953 cow oral cow.10 2019.3.14.cow.oral.10.rep cow.O.9.rep CGTCGCAGCCTT Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 D9 Plate 4 D9 29093 1 8/7/16 953 cow oral cow.10 2019.3.14.cow.skin.rump.19 cow.R.1 GATGCCTAATGA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 F4 Plate 3 F4 23242 2 3/15/16 1098 cow skin cow.19 2019.3.14.cow.skin.rump.14 cow.R.10 TAGACTTCAGAG Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 H7 Plate 4 H7 82486 1 3/26/17 722 cow skin cow.14 2019.3.14.cow.skin.rump.5 cow.R.11 GTTTGGCCACAC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 B1 Plate 4 B1 45163 0 1/0/00 0 cow skin cow.5 2019.3.14.cow.skin.rump.1 cow.R.12 AGGGACTTCAAT Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 E5 Plate 3 E5 82086 1 2/18/17 758 cow skin cow.1 2019.3.14.cow.skin.rump.13 cow.R.13 AGTAGTTTCCTT Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 A6 Plate 4 A6 82458 1 3/22/17 726 cow skin cow.13 2019.3.14.cow.skin.rump.8 cow.R.14 GCATTCGGCGTT Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 F3 Plate 4 F3 35516 1 4/12/17 705 cow skin cow.8 2019.3.14.cow.skin.rump.8.rep cow.R.14.rep TCTACATACATA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 F4 Plate 4 F4 35516 1 4/12/17 705 cow skin cow.8 2019.3.14.cow.fecal.4 cow.R.15 CGGAGAGACATG Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 H10 Plate 3 H10 29173 1 8/7/16 953 cow fecal cow.4 2019.3.14.cow.skin.rump.12 cow.R.16 GTCACGGACATT Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 C3 Plate 4 C3 67180 1 4/21/17 696 cow skin cow.12 2019.3.14.cow.skin.rump.2 cow.R.17 CATTTACATCAC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 G5 Plate 4 G5 35452 1 1/31/17 776 cow skin cow.2 2019.3.14.cow.skin.rump.9 cow.R.18 AGATTCGCTCGA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 B8 Plate 3 B8 74890 1 8/9/16 951 cow skin cow.9 2019.3.14.cow.skin.rump.6 cow.R.19 TTGCACCGTCGA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 A3 Plate 4 A3 75111 1 8/24/16 936 cow skin cow.6 2019.3.14.cow.udder.20 cow.R.2 TTCAGTTCGTTA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 B5 Plate 3 B5 82258 1 3/5/17 743 cow skin cow.20 2019.3.14.cow.skin.rump.3 cow.R.20 GCTGAGCCTTTG Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 G8 Plate 4 G8 66578 1 1/18/17 789 cow skin cow.3 2019.3.14.cow.skin.rump.11 cow.R.3 GTACGTCACTGA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 F5 Plate 3 F5 80192 1 10/20/16 879 cow skin cow.11 2019.3.14.cow.skin.rump.10 cow.R.4 CCGGCTTATGTG Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 F7 Plate 3 F7 29093 1 8/7/16 953 cow skin cow.10 2019.3.14.cow.skin.rump.15 cow.R.5 AGGGTGACTTTA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 H4 Plate 3 H4 74937 1 8/12/16 948 cow skin cow.15 2019.3.14.cow.skin.rump.16 cow.R.6 CCGCGTCTCAAC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 B6 Plate 3 B6 67108 1 4/14/17 703 cow skin cow.16 2019.3.14.cow.skin.rump.18 cow.R.7 ACTGTTTACTGT Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 C2 Plate 4 C2 82144 1 2/24/17 752 cow skin cow.18 2019.3.14.cow.skin.rump.7 cow.R.8 GTGAATGTTCGA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 E8 Plate 3 E8 82108 1 2/20/17 756 cow skin cow.7 2019.3.14.cow.udder.19 cow.U.1 CTCAGCGGGACG Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 G2 Plate 3 G2 23242 2 3/15/16 1098 cow udder cow.19 2019.3.14.cow.udder.5 cow.U.10 AAGTCTTATCTC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 A2 Plate 4 A2 45163 0 1/0/00 0 cow udder cow.5 2019.3.14.cow.udder.7 cow.U.11 GAGCCCAAAGAG Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 C7 Plate 4 C7 82108 1 2/20/17 756 cow udder cow.7 2019.3.14.cow.udder.1 cow.U.12 TGGCGCACGGAC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 G4 Plate 4 G4 82086 1 2/18/17 758 cow udder cow.1 2019.3.14.cow.udder.16 cow.U.13 ATAGGAATAACC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 F12 Plate 3 F12 67108 1 4/14/17 703 cow udder cow.16 2019.3.14.cow.udder.17 cow.U.14 TCTCGCACTGGA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 G2 Plate 4 G2 67167 1 4/20/17 697 cow udder cow.17 2019.3.14.cow.udder.14 cow.U.15 TCTGGCTACGAC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 A5 Plate 4 A5 82486 1 3/26/17 722 cow udder cow.14 2019.3.14.cow.udder.18 cow.U.16 GGCGTAACGGCA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 A2 Plate 3 A2 82144 1 2/24/17 752 cow udder cow.18 2019.3.14.cow.udder.15 cow.U.17 ACAGTTGTACGC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 D3 Plate 4 D3 74937 1 8/12/16 948 cow udder cow.15 2019.3.14.cow.udder.3 cow.U.18 TGACTGCGTTAG Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 B7 Plate 4 B7 66578 1 1/18/17 789 cow udder cow.3 2019.3.14.cow.udder.12 cow.U.19 GTGCAACCAATC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 E1 Plate 4 E1 67180 1 4/21/17 696 cow udder cow.12 2019.3.14.cow.skin.rump.20 cow.U.2 TTCCACACGTGG Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 D11 Plate 3 D11 82258 1 3/5/17 743 cow udder cow.20 2019.3.14.cow.udder.4 cow.U.20 CGAATACTGACA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 G7 Plate 3 G7 29173 1 8/7/16 953 cow udder cow.4 2019.3.14.cow.udder.11 cow.U.3 TATGTTGACGGC Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 E9 Plate 3 E9 80192 1 10/20/16 879 cow udder cow.11 2019.3.14.cow.skin.rump.20.rep cow.U.4 GTCGCTTGCACA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 A11 Plate 3 A11 82258 1 3/5/17 743 cow udder cow.20 2019.3.14.cow.udder.10 cow.U.5 ATAGTCCTTTAA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 F8 Plate 3 F8 29093 1 8/7/16 953 cow udder cow.10 2019.3.14.cow.udder.8 cow.U.6 CTAGAGCTCCCA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 H1 Plate 4 H1 35516 1 4/12/17 705 cow udder cow.8 2019.3.14.cow.udder.13 cow.U.7 CGTTCCTTGTTA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 C9 Plate 4 C9 82458 1 3/22/17 726 cow udder cow.13 2019.3.14.cow.udder.9 cow.U.8 CTCCGAACAACA Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 4 A4 Plate 4 A4 74890 1 8/9/16 951 cow udder cow.9 2019.3.14.cow.udder.2 cow.U.9 ACGTATTCGAAG Illumina miSeq GT Illumina GTGTGCCAGCMGCCGCGGTAA CSUPMF 4/1/19 Indexes FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT Sequencing by synthesis 16S rRNA V4 CSUPMF Illumina miSeq Plate 3 C4 Plate 3 C4 35452 1 1/31/17 776 cow udder cow.2 EC2.4 EC1.4 EC6.4 EC2.3 EC4.4 EC5.4 EC3.4 EC4.3 EC7.3 EC7.4 PC1.4 EC1.3 EC6.3 PC1.3 EC3.3